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VNG_RS04845 Lrp/AsnC family transcriptional regulator [ Halobacterium salinarum NRC-1 ]

Gene ID: 1447899, updated on 22-Oct-2024

Summary

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Gene symbol
VNG_RS04845
Gene description
Lrp/AsnC family transcriptional regulator
Locus tag
VNG_RS04845
Gene type
protein coding
Organism
Halobacterium salinarum NRC-1 (strain: NRC-1; ATCC 700922, culture-collection: ATCC:700922)
Lineage
Archaea; Methanobacteriati; Methanobacteriota; Stenosarchaea group; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium
Old locus tag
VNG1237C; VNG_1237C
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Genomic context

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Sequence:
NC_002607.1 (931821..932303)

NC_002607.1Genomic Context describing neighboring genes Neighboring gene PAS domain-containing protein Neighboring gene prephenate dehydrogenase/arogenate dehydrogenase family protein Neighboring gene class I SAM-dependent methyltransferase Neighboring gene NAD-binding protein Neighboring gene amino acid permease Neighboring gene 5'/3'-nucleotidase SurE

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002607.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A manual curation strategy to improve genome annotation: application to a set of haloarchael genomes. Pfeiffer F, et al. Life (Basel), 2015 Jun 2. PMID 26042526, Free PMC Article
  2. Evolution in the laboratory: the genome of Halobacterium salinarum strain R1 compared to that of strain NRC-1. Pfeiffer F, et al. Genomics, 2008 Apr. PMID 18313895
  3. The Lrp family of transcriptional regulators. Brinkman AB, et al. Mol Microbiol, 2003 Apr. PMID 12675791
  4. The many faces of the helix-turn-helix domain: transcription regulation and beyond. Aravind L, et al. FEMS Microbiol Rev, 2005 Apr. PMID 15808743

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
Lrp/AsnC family transcriptional regulator

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002607.1 Reference assembly

    Range
    931821..932303
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_010902895.1 MULTISPECIES: Lrp/AsnC family transcriptional regulator [Halobacterium]

    See identical proteins and their annotated locations for WP_010902895.1

    UniProtKB/TrEMBL
    A0A4D6GWS9, A0A841HD56, A0A895AD90, A0A895AUW1, B0R563, Q9HQB6
    Conserved Domains (1) summary
    COG1522
    Location:1 → 138
    Lrp; DNA-binding transcriptional regulator, Lrp family [Transcription]
Nucleotide Protein
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