U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

VNG_RS03135 ABC transporter permease [ Halobacterium salinarum NRC-1 ]

Gene ID: 1447569, updated on 31-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
VNG_RS03135
Gene description
ABC transporter permease
Locus tag
VNG_RS03135
Gene type
protein coding
Organism
Halobacterium salinarum NRC-1 (strain: NRC-1; ATCC 700922, culture-collection: ATCC:700922)
Lineage
Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium
Old locus tag
VNG0800H; VNG_0800H
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Sequence:
NC_002607.1 (602186..602782)

NC_002607.1Genomic Context describing neighboring genes Neighboring gene PLP-dependent aspartate aminotransferase family protein Neighboring gene Tat pathway signal protein Neighboring gene ABC transporter ATP-binding protein Neighboring gene tRNA-Arg Neighboring gene twin-arginine translocase TatA/TatE family subunit

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_002607.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. A manual curation strategy to improve genome annotation: application to a set of haloarchael genomes. Pfeiffer F, et al. Life (Basel), 2015 Jun 2. PMID 26042526, Free PMC Article
  2. Evolution in the laboratory: the genome of Halobacterium salinarum strain R1 compared to that of strain NRC-1. Pfeiffer F, et al. Genomics, 2008 Apr. PMID 18313895
  3. Structure and mechanism of ABC transporters. Wilkens S. F1000Prime Rep, 2015. PMID 25750732, Free PMC Article
  4. Structural diversity of ABC transporters. ter Beek J, et al. J Gen Physiol, 2014 Apr. PMID 24638992, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
ABC transporter permease

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002607.1 Reference assembly

    Range
    602186..602782
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_010902559.1 ABC transporter permease [Halobacterium salinarum]

    See identical proteins and their annotated locations for WP_010902559.1

    UniProtKB/TrEMBL
    A0A841HCA9, B0R467, Q9HR95
    Conserved Domains (1) summary
    COG0577
    Location:78 → 196
    SalY; ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.