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VNG_RS12445 MBL fold metallo-hydrolase [ Halobacterium salinarum NRC-1 ]

Gene ID: 1446827, updated on 22-Oct-2024

Summary

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Gene symbol
VNG_RS12445
Gene description
MBL fold metallo-hydrolase
Locus tag
VNG_RS12445
Gene type
protein coding
Organism
Halobacterium salinarum NRC-1 (strain: NRC-1; ATCC 700922, culture-collection: ATCC:700922)
Lineage
Archaea; Methanobacteriati; Methanobacteriota; Stenosarchaea group; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium
Old locus tag
VNG7043
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Genomic context

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Location:
plasmid: pNRC100
Sequence:
NC_001869.1 (45882..47075)

NC_001869.1Genomic Context describing neighboring genes Neighboring gene DsrE/DsrF/DrsH-like family protein Neighboring gene sulfurtransferase TusA family protein Neighboring gene YeeE/YedE family protein Neighboring gene YeeE/YedE family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001869.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A manual curation strategy to improve genome annotation: application to a set of haloarchael genomes. Pfeiffer F, et al. Life (Basel), 2015 Jun 2. PMID 26042526, Free PMC Article
  2. The 3-D structure of a zinc metallo-beta-lactamase from Bacillus cereus reveals a new type of protein fold. Carfi A, et al. EMBO J, 1995 Oct 16. PMID 7588620, Free PMC Article
  3. Extracting protein alignment models from the sequence database. Neuwald AF, et al. Nucleic Acids Res, 1997 May 1. PMID 9108146, Free PMC Article
  4. Evolution in the laboratory: the genome of Halobacterium salinarum strain R1 compared to that of strain NRC-1. Pfeiffer F, et al. Genomics, 2008 Apr. PMID 18313895

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
MBL fold metallo-hydrolase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001869.1 Reference assembly

    Range
    45882..47075
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_010890416.1 MBL fold metallo-hydrolase [Halobacterium salinarum]

    See identical proteins and their annotated locations for WP_010890416.1

    UniProtKB/TrEMBL
    B0R8N9, O54647
    Conserved Domains (2) summary
    cd01523
    Location:16 → 117
    RHOD_Lact_B; Member of the Rhodanese Homology Domain superfamily. This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.
    cd07724
    Location:132 → 312
    POD-like_MBL-fold; ETHE1 (PDO type I), persulfide dioxygenase A (PDOA, PDO type II) and related proteins; MBL-fold metallo-hydrolase domain
Nucleotide Protein
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