U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

MITF melanocyte inducing transcription factor [ Neogale vison (American mink) ]

Gene ID: 122909276, updated on 22-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
MITF
Gene description
melanocyte inducing transcription factor
Gene type
protein coding
RefSeq status
MODEL
Organism
Neogale vison
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Neogale
Also known as
E9PFN0
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See MITF in Genome Data Viewer
Location:
chromosome: 6
Exon count:
16
Annotation release Status Assembly Chr Location
100 current ASM_NN_V1 (GCF_020171115.1) 6 NC_058096.1 (186959808..187181995, complement)

Chromosome 6 - NC_058096.1Genomic Context describing neighboring genes Neighboring gene U2 spliceosomal RNA Neighboring gene MyoD family inhibitor domain containing 2 Neighboring gene U4 spliceosomal RNA Neighboring gene FERM domain containing 4B Neighboring gene leiomodin 3

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_058096.1 Chromosome 6 Reference ASM_NN_V1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in melanocyte differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
microphthalmia-associated transcription factor
Names
Microphthalmia-associated transcription factor

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Neovison vison Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM_NN_V1 Primary Assembly

Genomic

  1. NC_058096.1 Reference ASM_NN_V1 Primary Assembly

    Range
    186959808..187181995 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044253176.1 → XP_044109111.1  microphthalmia-associated transcription factor isoform X4

    UniProtKB/TrEMBL
    A0A8C7AA33
    Conserved Domains (1) summary
    cd18926
    Location:293 → 396
    bHLHzip_MITF; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in microphthalmia-associated transcription factor (MITF) and similar proteins

  2. XM_044253173.1 → XP_044109108.1  microphthalmia-associated transcription factor isoform X2

    UniProtKB/TrEMBL
    A0A8C7AA33
    Conserved Domains (1) summary
    cd18926
    Location:299 → 402
    bHLHzip_MITF; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in microphthalmia-associated transcription factor (MITF) and similar proteins

  3. XM_044253174.1 → XP_044109109.1  microphthalmia-associated transcription factor isoform X3

    UniProtKB/TrEMBL
    A0A8C7A5V1, A0A8C7AA33
    Conserved Domains (1) summary
    cd18926
    Location:294 → 397
    bHLHzip_MITF; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in microphthalmia-associated transcription factor (MITF) and similar proteins

  4. XM_044253172.1 → XP_044109107.1  microphthalmia-associated transcription factor isoform X1

    UniProtKB/TrEMBL
    A0A8C7AA33
    Conserved Domains (1) summary
    cd18926
    Location:300 → 403
    bHLHzip_MITF; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in microphthalmia-associated transcription factor (MITF) and similar proteins

  5. XM_044253180.1 → XP_044109115.1  microphthalmia-associated transcription factor isoform X8

    UniProtKB/TrEMBL
    A0A8C7AA33
    Conserved Domains (1) summary
    cd18926
    Location:267 → 370
    bHLHzip_MITF; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in microphthalmia-associated transcription factor (MITF) and similar proteins

  6. XM_044253181.1 → XP_044109116.1  microphthalmia-associated transcription factor isoform X9

    UniProtKB/TrEMBL
    A0A8C7AA33
    Conserved Domains (1) summary
    cd18926
    Location:248 → 351
    bHLHzip_MITF; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in microphthalmia-associated transcription factor (MITF) and similar proteins

  7. XM_044253185.1 → XP_044109120.1  microphthalmia-associated transcription factor isoform X9

    UniProtKB/TrEMBL
    A0A8C7AA33
    Conserved Domains (1) summary
    cd18926
    Location:248 → 351
    bHLHzip_MITF; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in microphthalmia-associated transcription factor (MITF) and similar proteins

  8. XM_044253184.1 → XP_044109119.1  microphthalmia-associated transcription factor isoform X9

    UniProtKB/TrEMBL
    A0A8C7AA33
    Conserved Domains (1) summary
    cd18926
    Location:248 → 351
    bHLHzip_MITF; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in microphthalmia-associated transcription factor (MITF) and similar proteins

  9. XM_044253178.1 → XP_044109113.1  microphthalmia-associated transcription factor isoform X6

    UniProtKB/TrEMBL
    A0A8C7AA33
    Conserved Domains (1) summary
    cd18926
    Location:283 → 386
    bHLHzip_MITF; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in microphthalmia-associated transcription factor (MITF) and similar proteins

  10. XM_044253179.1 → XP_044109114.1  microphthalmia-associated transcription factor isoform X7

    UniProtKB/TrEMBL
    A0A8C7A647, A0A8C7AA33
    Conserved Domains (1) summary
    cd18926
    Location:278 → 381
    bHLHzip_MITF; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in microphthalmia-associated transcription factor (MITF) and similar proteins

  11. XM_044253177.1 → XP_044109112.1  microphthalmia-associated transcription factor isoform X5

    UniProtKB/TrEMBL
    A0A8C7AA33
    Conserved Domains (1) summary
    cd18926
    Location:284 → 387
    bHLHzip_MITF; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in microphthalmia-associated transcription factor (MITF) and similar proteins

  12. XM_044253182.1 → XP_044109117.1  microphthalmia-associated transcription factor isoform X10

    Conserved Domains (1) summary
    cd18926
    Location:193 → 296
    bHLHzip_MITF; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in microphthalmia-associated transcription factor (MITF) and similar proteins

  13. XM_044253183.1 → XP_044109118.1  microphthalmia-associated transcription factor isoform X11

    UniProtKB/TrEMBL
    A0A8C7AAC5
    Conserved Domains (1) summary
    cd18926
    Location:187 → 290
    bHLHzip_MITF; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in microphthalmia-associated transcription factor (MITF) and similar proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.