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LOC11445368 bZIP transcription factor 11 [ Medicago truncatula (barrel medic) ]

Gene ID: 11445368, updated on 7-Dec-2023

Summary

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Gene symbol
LOC11445368
Gene description
bZIP transcription factor 11
Locus tag
MtrunA17_Chr4g0035421
Gene type
protein coding
RefSeq status
MODEL
Organism
Medicago truncatula
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
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Genomic context

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See LOC11445368 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
1
Annotation release Status Assembly Chr Location
102 current MtrunA17r5.0-ANR (GCF_003473485.1) 4 NC_053045.1 (34822691..34824183)
101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 4 NC_016410.2 (26689520..26691017)

Chromosome 4 - NC_053045.1Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol/phosphatidylcholine transfer protein SFH6 Neighboring gene phosphatidylinositol/phosphatidylcholine transfer protein SFH8 Neighboring gene uncharacterized LOC112420873 Neighboring gene small nucleolar RNA Z159/U59 Neighboring gene probable nucleolar protein 5-1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bZIP transcription factor 11
Names
BZIP transcription factor bZIP124
putative transcription factor bZIP family

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MtrunA17r5.0-ANR Primary Assembly

Genomic

  1. NC_053045.1 Reference MtrunA17r5.0-ANR Primary Assembly

    Range
    34822691..34824183
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003606932.4 → XP_003606980.1  bZIP transcription factor 11

    See identical proteins and their annotated locations for XP_003606980.1

    UniProtKB/TrEMBL
    G7JIJ4, I3SH32
    Conserved Domains (1) summary
    cd14702
    Location:31 → 81
    bZIP_plant_GBF1; Basic leucine zipper (bZIP) domain of Plant G-box binding factor 1 (GBF1)-like transcription factors: a DNA-binding and dimerization domain
Nucleotide Protein
Heading Accession and Version

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