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LOC11433502 ethylene-responsive transcription factor ERF017 [ Medicago truncatula (barrel medic) ]

Gene ID: 11433502, updated on 7-Dec-2023

Summary

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Gene symbol
LOC11433502
Gene description
ethylene-responsive transcription factor ERF017
Locus tag
MtrunA17_Chr3g0136541
Gene type
protein coding
RefSeq status
MODEL
Organism
Medicago truncatula
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
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Genomic context

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See LOC11433502 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Annotation release Status Assembly Chr Location
102 current MtrunA17r5.0-ANR (GCF_003473485.1) 3 NC_053044.1 (52098080..52099137, complement)
101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 3 NC_016409.2 (48644913..48645977, complement)

Chromosome 3 - NC_053044.1Genomic Context describing neighboring genes Neighboring gene 3beta-hydroxysteroid-dehydrogenase/decarboxylase Neighboring gene DNA cross-link repair protein SNM1 Neighboring gene ethylene-responsive transcription factor ERF017 Neighboring gene protein WHAT'S THIS FACTOR 1 homolog, chloroplastic

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ethylene-responsive transcription factor ERF017
Names
ethylene-responsive transcription factor ERF018
putative transcription factor AP2-EREBP family

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MtrunA17r5.0-ANR Primary Assembly

Genomic

  1. NC_053044.1 Reference MtrunA17r5.0-ANR Primary Assembly

    Range
    52098080..52099137 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003603196.3 → XP_003603244.2  ethylene-responsive transcription factor ERF017

    UniProtKB/TrEMBL
    A0A396J1D7, G7J954
    Conserved Domains (1) summary
    smart00380
    Location:42 → 95
    AP2; DNA-binding domain in plant proteins such as APETALA2 and EREBPs
Nucleotide Protein
Heading Accession and Version

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