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Ache acetylcholinesterase [ Mus musculus (house mouse) ]

Gene ID: 11423, updated on 2-Nov-2024

Summary

Official Symbol
Acheprovided by MGI
Official Full Name
acetylcholinesteraseprovided by MGI
Primary source
MGI:MGI:87876
See related
Ensembl:ENSMUSG00000023328 AllianceGenome:MGI:87876
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Enables acetylcholinesterase activity; identical protein binding activity; and laminin binding activity. Involved in positive regulation of cold-induced thermogenesis. Acts upstream of or within several processes, including acetylcholine catabolic process; acetylcholine receptor signaling pathway; and regulation of receptor recycling. Located in several cellular components, including basement membrane; cell surface; and neuromuscular junction. Is expressed in several structures, including alimentary system; genitourinary system; musculature; nervous system; and sensory organ. Human ortholog(s) of this gene implicated in Alzheimer's disease; drug dependence (multiple); epilepsy; myasthenia gravis; and subacute delirium. Orthologous to human ACHE (acetylcholinesterase (Yt blood group)). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Broad expression in cerebellum adult (RPKM 25.6), thymus adult (RPKM 23.5) and 19 other tissues See more
Orthologs
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Genomic context

See Ache in Genome Data Viewer
Location:
5 G2; 5 76.32 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (137286516..137292728)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (137288247..137294466)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene peptidyl-prolyl cis-trans isomerase G-like Neighboring gene mucin 3A, cell surface associated Neighboring gene predicted gene 42456 Neighboring gene microRNA 8116 Neighboring gene microRNA 7036 Neighboring gene UFM1-specific peptidase 1 Neighboring gene serrate RNA effector molecule homolog (Arabidopsis)

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 
  • Targeted (8)  1 citation

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables acetylcholine binding IEA
Inferred from Electronic Annotation
more info
 
enables acetylcholine binding ISO
Inferred from Sequence Orthology
more info
 
enables acetylcholinesterase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables acetylcholinesterase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables acetylcholinesterase activity ISO
Inferred from Sequence Orthology
more info
 
enables choline binding ISO
Inferred from Sequence Orthology
more info
 
enables cholinesterase activity ISO
Inferred from Sequence Orthology
more info
 
enables collagen binding IEA
Inferred from Electronic Annotation
more info
 
enables collagen binding ISO
Inferred from Sequence Orthology
more info
 
enables hydrolase activity ISO
Inferred from Sequence Orthology
more info
 
enables identical protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables laminin binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables laminin binding ISO
Inferred from Sequence Orthology
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein homodimerization activity IEA
Inferred from Electronic Annotation
more info
 
enables protein homodimerization activity ISO
Inferred from Sequence Orthology
more info
 
enables serine hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
enables serine hydrolase activity ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in acetylcholine catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within acetylcholine catabolic process IDA
Inferred from Direct Assay
more info
PubMed 
involved_in acetylcholine catabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in acetylcholine metabolic process ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within acetylcholine receptor signaling pathway IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 
involved_in cell adhesion ISO
Inferred from Sequence Orthology
more info
 
involved_in choline metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in choline metabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in osteoblast development IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of axonogenesis ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of cold-induced thermogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of dendrite morphogenesis ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within receptor internalization IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within regulation of receptor recycling IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in response to insulin ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within retina development in camera-type eye IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in synapse assembly ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 
located_in Golgi apparatus ISO
Inferred from Sequence Orthology
more info
 
located_in axon ISO
Inferred from Sequence Orthology
more info
 
located_in basement membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in cell surface IDA
Inferred from Direct Assay
more info
PubMed 
located_in cell surface ISO
Inferred from Sequence Orthology
more info
 
located_in dendrite ISO
Inferred from Sequence Orthology
more info
 
located_in endoplasmic reticulum lumen ISO
Inferred from Sequence Orthology
more info
 
located_in extracellular region ISO
Inferred from Sequence Orthology
more info
 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in extracellular space IDA
Inferred from Direct Assay
more info
PubMed 
located_in membrane ISO
Inferred from Sequence Orthology
more info
 
located_in neuromuscular junction IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in neuromuscular junction ISO
Inferred from Sequence Orthology
more info
 
located_in neuronal cell body ISO
Inferred from Sequence Orthology
more info
 
located_in nuclear envelope ISO
Inferred from Sequence Orthology
more info
 
located_in perinuclear region of cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in perinuclear region of cytoplasm ISO
Inferred from Sequence Orthology
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in postsynaptic membrane ISO
Inferred from Sequence Orthology
more info
 
located_in presynaptic membrane ISO
Inferred from Sequence Orthology
more info
 
located_in side of membrane IEA
Inferred from Electronic Annotation
more info
 
located_in synapse IDA
Inferred from Direct Assay
more info
PubMed 
located_in synapse ISO
Inferred from Sequence Orthology
more info
 
is_active_in synaptic cleft ISO
Inferred from Sequence Orthology
more info
 
located_in synaptic cleft ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
acetylcholinesterase
NP_001276939.1
NP_033729.1
XP_036020624.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001290010.1NP_001276939.1  acetylcholinesterase precursor

    See identical proteins and their annotated locations for NP_001276939.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript. Both variants 1 and 2 encode the same protein.
    Source sequence(s)
    AK036259, AK042335, BQ175376, BY261443
    Consensus CDS
    CCDS19763.1
    UniProtKB/Swiss-Prot
    P21836
    UniProtKB/TrEMBL
    B9UIT4, Q543Z1
    Related
    ENSMUSP00000083097.4, ENSMUST00000085934.4
    Conserved Domains (3) summary
    COG0657
    Location:132237
    Aes; Acetyl esterase/lipase [Lipid transport and metabolism]
    pfam00135
    Location:36563
    COesterase; Carboxylesterase family
    pfam08674
    Location:578611
    AChE_tetra; Acetylcholinesterase tetramerization domain
  2. NM_009599.4NP_033729.1  acetylcholinesterase precursor

    See identical proteins and their annotated locations for NP_033729.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) uses an alternate splice site in the 5' UTR compared to variant 1. Both variants 1 and 2 encode the same protein.
    Source sequence(s)
    AK042335, BQ175376, BY261443
    Consensus CDS
    CCDS19763.1
    UniProtKB/Swiss-Prot
    P21836
    UniProtKB/TrEMBL
    B9UIT4, Q543Z1
    Related
    ENSMUSP00000024099.5, ENSMUST00000024099.11
    Conserved Domains (3) summary
    COG0657
    Location:132237
    Aes; Acetyl esterase/lipase [Lipid transport and metabolism]
    pfam00135
    Location:36563
    COesterase; Carboxylesterase family
    pfam08674
    Location:578611
    AChE_tetra; Acetylcholinesterase tetramerization domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    137286516..137292728
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036164731.1XP_036020624.1  acetylcholinesterase isoform X1

    UniProtKB/TrEMBL
    B9UIT4
    Conserved Domains (1) summary
    pfam00135
    Location:37563
    COesterase; Carboxylesterase family

RNA

  1. XR_004942425.1 RNA Sequence

  2. XR_001784593.3 RNA Sequence