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LOC11414971 probable WRKY transcription factor 31 [ Medicago truncatula (barrel medic) ]

Gene ID: 11414971, updated on 7-Dec-2023

Summary

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Gene symbol
LOC11414971
Gene description
probable WRKY transcription factor 31
Locus tag
MtrunA17_Chr2g0322391
Gene type
protein coding
RefSeq status
MODEL
Organism
Medicago truncatula
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
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Genomic context

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See LOC11414971 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
5
Annotation release Status Assembly Chr Location
102 current MtrunA17r5.0-ANR (GCF_003473485.1) 2 NC_053043.1 (43155615..43159333)
101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 2 NC_016408.2 (37051307..37055059)

Chromosome 2 - NC_053043.1Genomic Context describing neighboring genes Neighboring gene cellulose synthase-like protein H1 Neighboring gene cellulose synthase-like protein H1 Neighboring gene mitogen-activated protein kinase kinase kinase 17 Neighboring gene B-cell receptor-associated protein 31

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable WRKY transcription factor 31
Names
WRKY1b transcription factor
putative transcription factor WRKY family

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MtrunA17r5.0-ANR Primary Assembly

Genomic

  1. NC_053043.1 Reference MtrunA17r5.0-ANR Primary Assembly

    Range
    43155615..43159333
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003596902.4 → XP_003596950.1  probable WRKY transcription factor 31 isoform X1

    See identical proteins and their annotated locations for XP_003596950.1

    UniProtKB/TrEMBL
    G7ITV7
    Conserved Domains (2) summary
    smart00774
    Location:349 → 406
    WRKY; DNA binding domain
    cl21462
    Location:169 → 202
    bZIP; Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain

  2. XM_024775801.2 → XP_024631569.1  probable WRKY transcription factor 31 isoform X2

    UniProtKB/TrEMBL
    A2Q4G8
    Conserved Domains (2) summary
    smart00774
    Location:198 → 255
    WRKY; DNA binding domain
    cl21462
    Location:18 → 51
    bZIP; Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain
Nucleotide Protein
Heading Accession and Version

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