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LOC11412129 transcription factor LAX PANICLE 1 [ Medicago truncatula (barrel medic) ]

Gene ID: 11412129, updated on 7-Dec-2023

Summary

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Gene symbol
LOC11412129
Gene description
transcription factor LAX PANICLE 1
Locus tag
MtrunA17_Chr7g0243041
Gene type
protein coding
RefSeq status
MODEL
Organism
Medicago truncatula
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
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Genomic context

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See LOC11412129 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
1
Annotation release Status Assembly Chr Location
102 current MtrunA17r5.0-ANR (GCF_003473485.1) 7 NC_053048.1 (32420152..32421143, complement)
101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 7 NC_016413.2 (25644616..25645592, complement)

Chromosome 7 - NC_053048.1Genomic Context describing neighboring genes Neighboring gene putative F-box protein At3g16210 Neighboring gene disease resistance protein RUN1-like Neighboring gene BAG family molecular chaperone regulator 4-like Neighboring gene ammonium transporter 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor LAX PANICLE 1
Names
helix loop helix DNA-binding domain protein
putative adenylylsulfatase transcription factor bHLH family

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MtrunA17r5.0-ANR Primary Assembly

Genomic

  1. NC_053048.1 Reference MtrunA17r5.0-ANR Primary Assembly

    Range
    32420152..32421143 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003623275.4 → XP_003623323.1  transcription factor LAX PANICLE 1

    See identical proteins and their annotated locations for XP_003623323.1

    UniProtKB/TrEMBL
    G7KSC0
    Conserved Domains (1) summary
    smart00353
    Location:38 → 84
    HLH; helix loop helix domain
Nucleotide Protein
Heading Accession and Version

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