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LOC112268419 uncharacterized LOC112268419 [ Homo sapiens (human) ]

Gene ID: 112268419, updated on 17-Jun-2024

Summary

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Gene symbol
LOC112268419
Gene description
uncharacterized LOC112268419
See related
Ensembl:ENSG00000286244
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
2p13.1
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (73834362..73856977, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (73842524..73865124, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene chromosome 2 open reading frame 78 Neighboring gene uncharacterized LOC105374807 Neighboring gene ReSE screen-validated silencer GRCh37_chr2:74055859-74056077 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr2:74057585-74058784 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 16035 Neighboring gene STAM binding protein Neighboring gene zinc finger DHHC-type palmitoyltransferase 6 pseudogene Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:74119211-74120024 Neighboring gene actin gamma 2, smooth muscle Neighboring gene ReSE screen-validated silencer GRCh37_chr2:74139533-74139680

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    73834362..73856977 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007087106.1 RNA Sequence

    Related
    ENST00000650890.1

  2. XR_007087095.1 RNA Sequence

  3. XR_002959405.2 RNA Sequence

  4. XR_007087101.1 RNA Sequence

  5. XR_007087089.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    73842524..73865124 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007072210.1 RNA Sequence

  2. XR_007072207.1 RNA Sequence

  3. XR_007072209.1 RNA Sequence

  4. XR_007072208.1 RNA Sequence

Nucleotide Protein
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