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LOC112267900 uncharacterized LOC112267900 [ Homo sapiens (human) ]

Gene ID: 112267900, updated on 27-Aug-2024

Summary

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Gene symbol
LOC112267900
Gene description
uncharacterized LOC112267900
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
1p32.2
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (56963972..57014697)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (56842782..56893586)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene NANOG hESC enhancer GRCh37_chr1:57230284-57230838 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_8694 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_8756 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1079 Neighboring gene FYN binding protein 2 Neighboring gene Sharpr-MPRA regulatory region 9770 Neighboring gene uncharacterized LOC105378748 Neighboring gene complement C8 alpha chain Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr1:57577767-57578301 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1080 Neighboring gene complement C8 beta chain Neighboring gene uncharacterized LOC105378747 Neighboring gene DAB adaptor protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    56963972..57014697
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007066117.1 RNA Sequence

  2. XR_007066120.1 RNA Sequence

  3. XR_007066112.1 RNA Sequence

  4. XR_007066115.1 RNA Sequence

  5. XR_007066116.1 RNA Sequence

  6. XR_007066114.1 RNA Sequence

  7. XR_007066118.1 RNA Sequence

  8. XR_007066119.1 RNA Sequence

  9. XR_007066113.1 RNA Sequence

  10. XR_007066122.1 RNA Sequence

  11. XR_007066121.1 RNA Sequence

  12. XR_002958544.2 RNA Sequence

  13. XR_001737646.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    56842782..56893586
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007070239.1 RNA Sequence

  2. XR_007070242.1 RNA Sequence

  3. XR_007070238.1 RNA Sequence

  4. XR_007070236.1 RNA Sequence

  5. XR_007070237.1 RNA Sequence

  6. XR_007070235.1 RNA Sequence

  7. XR_007070240.1 RNA Sequence

  8. XR_007070241.1 RNA Sequence

  9. XR_007070244.1 RNA Sequence

  10. XR_007070234.1 RNA Sequence

  11. XR_007070243.1 RNA Sequence

  12. XR_007070232.1 RNA Sequence

  13. XR_007070233.1 RNA Sequence

Nucleotide Protein
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