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SCO7314 RNA polymerase sigma factor [ Streptomyces coelicolor A3(2) ]

Gene ID: 1102752, discontinued on 9-Sep-2022
  • This record was discontinued.

Summary

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Gene symbol
SCO7314
Gene description
RNA polymerase sigma factor
Locus tag
SCO7314
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SC5F8.24
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Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Miscellaneous features

  • Loc: 8120688-8121353 Pfam match to entry PF00140 sigma70, Sigma-70 factor, score 189.70, E-value 4.7e-53

General protein information

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Names
RNA polymerase sigma factor
NP_631369.1
  • SC5F8.24, probable RNA polymerase sigma factor, len: 299 aa. Highly similar to many e.g. Streptomyces coelicolor SW:RPOF_STRCO (EMBL:L11648) RNA polymerase sigma-F factor, SigF (287 aa), fasta scores opt: 687 z-score: 772.9 E(): 0 43.6% identity in 275 aa overlap. Contains a Pfam match to entry PF00140 sigma70, Sigma-70 factor and a helix-turn-helix motif situated between residues 242..263 (+6.95 SD).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    8120541..8121440
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_631369.1 RNA polymerase sigma factor [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
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