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SCO6194 response regulator [ Streptomyces coelicolor A3(2) ]

Gene ID: 1101635, discontinued on 9-Sep-2022
  • This record was discontinued.

Summary

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Gene symbol
SCO6194
Gene description
response regulator
Locus tag
SCO6194
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
SC2G5.15c
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Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Miscellaneous features

  • Loc: c6804071-6803877 Pfam match to entry PF00196 GerE, Bacterial regulatory proteins, luxR family, score 58.30, E-value1.7e-13

General protein information

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Names
response regulator
NP_630297.1
  • SC2G5.15c, possible response regulator, len:279aa; similar to many eg. TR:P72471 (EMBL:U63847) response regulator homolog from Streptomyces lividans (225aa) fasta scores; opt: 184, z-score: 203.6, E():0.00047, (32.7% identity in 208 aa overlap). Also C-terminal region similar to TR:P72402 (EMBL:Y07902) transcriptional regulator, RedZ (217 aa) fasta scores; opt:179, z-score:198.6, E():0.00089, (47.6 % identity in 63 aa overlap). Contains Pfam match to en try PF00196 GerE, Bacterial regulatory proteins, luxR family, score 58.30, E-value 1.7e-13. Contains possible helix-turn-helix at 234-255aa Score 1690 (+4.94 SD).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    6803232..6804071 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_630297.1 response regulator [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
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Molecular Biology Databases