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SCO1276 RNA polymerase ECF sigma factor [ Streptomyces coelicolor A3(2) ]

Gene ID: 1096699, discontinued on 9-Sep-2022
  • This record was discontinued.

Summary

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Gene symbol
SCO1276
Gene description
RNA polymerase ECF sigma factor
Locus tag
SCO1276
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Streptomyces coelicolor A3(2) (serovar: A3(2))
Lineage
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces; Streptomyces albidoflavus group
Also known as
2SCG18.23; sigJ
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Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003888.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. results suggest that sigJ gene is under the control of stress-response sigmaH, thus indicating a cascade of sigma factors in Streptomyces stress response and development
    Title: Cascade of sigma factors in streptomycetes: identification of a new extracytoplasmic function sigma factor sigmaJ that is under the control of the stress-response sigma factor sigmaH in Streptomyces coelicolor A3(2).
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General gene information

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Miscellaneous features

  • Loc: 1346843-1347004 Pfam match to entry PF00776 Sigma70_ECF, Sigma-70 factor (ECF subfamily), score 17.30, E-value 0.0012

General protein information

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Names
RNA polymerase ECF sigma factor
NP_625563.1
  • 2SCG18.23, sigJ, RNA polymerase ECF sigma factor, len: 198 aa; identical to previously sequenced TR:AAF35371 (EMBL:AF225460) Streptomyces coelicolor RNA polymerase ECF sigma factor SigJ, 198 aa. Contains Pfam match to entry PF00776 Sigma70_ECF, Sigma-70 factor (ECF subfamily)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003888.3 Reference assembly

    Range
    1346693..1347289
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_625563.1 RNA polymerase ECF sigma factor [Streptomyces coelicolor A3(2)]

    Status: REVIEWED

Nucleotide Protein
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