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LOC107986672 uncharacterized LOC107986672 [ Homo sapiens (human) ]

Gene ID: 107986672, updated on 17-Sep-2024

Summary

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Gene symbol
LOC107986672
Gene description
uncharacterized LOC107986672
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC107986672 in Genome Data Viewer
Location:
6q27
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (167126305..167127327, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25444 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17787 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17788 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17789 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17790 Neighboring gene microRNA 3939 Neighboring gene centrosomal protein 43 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25445 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25446 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25447 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25448 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:167493737-167494237 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25449 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25450 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25451 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25452 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25453 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25454 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25455 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:167532493-167532993 Neighboring gene C-C motif chemokine receptor 6 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25456 Neighboring gene uncharacterized LOC112267970 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:167556216-167557144 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:167557145-167558073 Neighboring gene G protein-coupled receptor 31

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000006.12 Chromosome 6 Reference GRCh38.p14 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    167126305..167127327 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001744470.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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