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LOC107984440 uncharacterized LOC107984440 [ Homo sapiens (human) ]

Gene ID: 107984440, updated on 22-Oct-2024

Summary

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Gene symbol
LOC107984440
Gene description
uncharacterized LOC107984440
See related
Ensembl:ENSG00000256609
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC107984440 in Genome Data Viewer
Location:
12q24.23
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (119181167..119184095, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (119168593..119171523, complement)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene serine/arginine repetitive matrix 4 Neighboring gene uncharacterized LOC112268101 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:119591444-119591976 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:119591977-119592507 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:119604289-119604789 Neighboring gene uncharacterized LOC105370024 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr12:119613960-119615159 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:119616339-119617088 Neighboring gene PDGFA associated protein 1 pseudogene Neighboring gene heat shock protein family B (small) member 8 Neighboring gene uncharacterized LOC105370026 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr12:119656501-119657002

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    119181167..119184095 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007063482.1 RNA Sequence

  2. XR_001749345.2 RNA Sequence

  3. XR_001749344.2 RNA Sequence

    Related
    ENST00000535921.2

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    119168593..119171523 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007083141.1 RNA Sequence

  2. XR_007083140.1 RNA Sequence

  3. XR_007083139.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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