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LOC107984388 uncharacterized LOC107984388 [ Homo sapiens (human) ]

Gene ID: 107984388, updated on 17-Jun-2024

Summary

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Gene symbol
LOC107984388
Gene description
uncharacterized LOC107984388
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC107984388 in Genome Data Viewer
Location:
11q23.1
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (112337284..112343534)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100132686 Neighboring gene placenta expressed transcript 1 Neighboring gene long intergenic non-protein coding RNA 2762 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5533 Neighboring gene ST13, Hsp70 interacting protein pseudogene 10 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr11:112160899-112161647 Neighboring gene NANOG hESC enhancer GRCh37_chr11:112178337-112178838 Neighboring gene RNA, U6 small nuclear 44, pseudogene Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr11:112236216-112237415 Neighboring gene NANOG hESC enhancer GRCh37_chr11:112283075-112283627 Neighboring gene ReSE screen-validated silencer GRCh37_chr11:112332561-112332759 Neighboring gene ribosomal protein L23a pseudogene 62

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000011.10 Chromosome 11 Reference GRCh38.p14 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    112337284..112343534
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001748386.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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