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LOC107984245 uncharacterized LOC107984245 [ Homo sapiens (human) ]

Gene ID: 107984245, updated on 17-Sep-2024

Summary

Gene symbol
LOC107984245
Gene description
uncharacterized LOC107984245
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See LOC107984245 in Genome Data Viewer
Location:
10q22.3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (78431829..78461777, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (79300888..79330864, complement)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124902468 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2518 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:80088023-80088524 Neighboring gene uncharacterized LOC124902568 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr10:80136659-80137605 Neighboring gene Sharpr-MPRA regulatory region 6049 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:80168557-80169368 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:80180451-80180952 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:80180953-80181452 Neighboring gene Sharpr-MPRA regulatory region 14781 Neighboring gene uncharacterized LOC105378378 Neighboring gene uncharacterized LOC107984246 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:80231795-80232752 Neighboring gene VISTA enhancer hs1491 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:80303319-80303820 Neighboring gene MPRA-validated peak1025 silencer Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr10:80319111-80320024 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:80330027-80330528 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:80330529-80331028 Neighboring gene uncharacterized LOC105378379 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:80491819-80492320 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:80492321-80492820

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    78431829..78461777 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001747513.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    79300888..79330864 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007081377.1 RNA Sequence