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LOC106452076 GATA transcription factor 17 [ Brassica napus (rape) ]

Gene ID: 106452076, updated on 6-Jun-2024

Summary

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Gene symbol
LOC106452076
Gene description
GATA transcription factor 17
Locus tag
HID58_019355
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106452076 in Genome Data Viewer
Location:
chromosome: A5
Exon count:
2
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) A5 NC_063438.1 (22756085..22756970)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) A5 NC_027761.2 (26245578..26246830)

Chromosome A5 - NC_063438.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106453997 Neighboring gene acetate/butyrate--CoA ligase AAE7, peroxisomal Neighboring gene two-component response regulator ARR1 Neighboring gene probable polygalacturonase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GATA transcription factor 17
Names
BnaA05g23040D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063438.1 Reference Da-Ae Primary Assembly

    Range
    22756085..22756970
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013894095.3 → XP_013749549.2  GATA transcription factor 17

    UniProtKB/TrEMBL
    A0A816TQ90
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases