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LOC106427656 B3 domain-containing protein At5g06250 [ Brassica napus (rape) ]

Gene ID: 106427656, updated on 30-Nov-2023

Summary

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Gene symbol
LOC106427656
Gene description
B3 domain-containing protein At5g06250
Locus tag
HID58_008299
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106427656 in Genome Data Viewer
Location:
chromosome: A3
Exon count:
3
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) A3 NC_063436.1 (1068403..1070943, complement)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) A3 NC_027759.2 (1150527..1155173, complement)

Chromosome A3 - NC_063436.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106427686 Neighboring gene uncharacterized BNAA03G01950D Neighboring gene 40S ribosomal protein S17-4 Neighboring gene protein GL2-INTERACTING REPRESSOR 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
B3 domain-containing protein At5g06250
Names
BnaA02g29460D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063436.1 Reference Da-Ae Primary Assembly

    Range
    1068403..1070943 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048768643.1 → XP_048624600.1  B3 domain-containing protein At5g06250

    UniProtKB/TrEMBL
    A0A078I8L8

  2. XM_013868380.3 → XP_013723834.1  B3 domain-containing protein At5g06250

    UniProtKB/TrEMBL
    A0A078I8L8
    Conserved Domains (1) summary
    pfam02362
    Location:49 → 155
    B3; B3 DNA binding domain

  3. XM_013868386.3 → XP_013723840.1  B3 domain-containing protein At5g06250

    UniProtKB/TrEMBL
    A0A078I8L8
    Conserved Domains (1) summary
    pfam02362
    Location:49 → 155
    B3; B3 DNA binding domain
Nucleotide Protein
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