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LOC106408025 transcription factor bHLH28-like [ Brassica napus (rape) ]

Gene ID: 106408025, updated on 30-Nov-2023

Summary

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Gene symbol
LOC106408025
Gene description
transcription factor bHLH28-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
Also known as
BnabHLH352
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Genomic context

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See LOC106408025 in Genome Data Viewer
Location:
chromosome: C7
Exon count:
1
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) C7 NC_063450.1 (34597273..34599359)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) C4 NC_027770.2 (51706635..51707450)

Chromosome C7 - NC_063450.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125589833 Neighboring gene uncharacterized LOC106408988 Neighboring gene uncharacterized LOC125590570 Neighboring gene uncharacterized LOC125590571

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor bHLH28-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063450.1 Reference Da-Ae Primary Assembly

    Range
    34597273..34599359
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013848858.2 → XP_013704312.1  transcription factor bHLH28-like

    UniProtKB/TrEMBL
    A0A078H7R5, A0A679KK48
    Conserved Domains (1) summary
    cl00081
    Location:95 → 170
    bHLH_SF; basic Helix Loop Helix (bHLH) domain superfamily
Nucleotide Protein
Heading Accession and Version

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