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LOC106405141 NAC domain-containing protein 102-like [ Brassica napus (rape) ]

Gene ID: 106405141, updated on 30-Nov-2023

Summary

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Gene symbol
LOC106405141
Gene description
NAC domain-containing protein 102-like
Locus tag
HID58_049798
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
Also known as
NAC5-1
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Genomic context

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See LOC106405141 in Genome Data Viewer
Location:
chromosome: C2
Exon count:
3
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) C2 NC_063445.1 (56552640..56554030, complement)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) A2 NC_027758.2 (33505496..33506894, complement)

Chromosome C2 - NC_063445.1Genomic Context describing neighboring genes Neighboring gene probable E3 ubiquitin-protein ligase ARI15 Neighboring gene diacylglycerol kinase 2-like Neighboring gene uncharacterized LOC106405131 Neighboring gene beta-galactosidase 6-like Neighboring gene amino acid permease 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
NAC domain-containing protein 102-like
Names
BnaA02g33910D
NAC-domain protein 5-1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001315627.1 → NP_001302556.1  NAC domain-containing protein 102-like

    Status: PROVISIONAL

    Source sequence(s)
    AY245881
    UniProtKB/TrEMBL
    A0A0C4MXF1, Q7Y1B0
    Conserved Domains (1) summary
    pfam02365
    Location:8 → 131
    NAM; No apical meristem (NAM) protein

RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063445.1 Reference Da-Ae Primary Assembly

    Range
    56552640..56554030 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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