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LOC106404870 zinc finger protein ZAT12-like [ Brassica napus (rape) ]

Gene ID: 106404870, updated on 30-Nov-2023

Summary

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Gene symbol
LOC106404870
Gene description
zinc finger protein ZAT12-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106404870 in Genome Data Viewer
Location:
chromosome: C4
Exon count:
1
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) C4 NC_063447.1 (17416662..17418870, complement)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) C6 NC_027772.2 (4286352..4287244, complement)

Chromosome C4 - NC_063447.1Genomic Context describing neighboring genes Neighboring gene histone H2B.3 Neighboring gene transfer RNA cysteine (anticodon GCA) Neighboring gene uncharacterized BNAC04G15550D Neighboring gene glutelin type-D 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in response to chitin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein ZAT12-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063447.1 Reference Da-Ae Primary Assembly

    Range
    17416662..17418870 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048754501.1 → XP_048610458.1  zinc finger protein ZAT12-like

    UniProtKB/TrEMBL
    A0A078FMV0
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases