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LOC106399307 ethylene-responsive transcription factor ERF023 [ Brassica napus (rape) ]

Gene ID: 106399307, updated on 30-Nov-2023

Summary

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Gene symbol
LOC106399307
Gene description
ethylene-responsive transcription factor ERF023
Locus tag
HID58_063800
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106399307 in Genome Data Viewer
Location:
chromosome: C5
Exon count:
1
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) C5 NC_063448.1 (415300..416113)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) C5 NC_027771.2 (450365..451192)

Chromosome C5 - NC_063448.1Genomic Context describing neighboring genes Neighboring gene cytochrome P450 703A2 Neighboring gene transcription factor bHLH13 Neighboring gene uncharacterized LOC106399967 Neighboring gene ORM1-like protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ethylene-responsive transcription factor ERF023
Names
BnaC05g00680D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063448.1 Reference Da-Ae Primary Assembly

    Range
    415300..416113
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013839782.3 → XP_013695236.1  ethylene-responsive transcription factor ERF023

    UniProtKB/TrEMBL
    A0A078FQP0, A0A078HK18
    Conserved Domains (1) summary
    smart00380
    Location:42 → 98
    AP2; DNA-binding domain in plant proteins such as APETALA2 and EREBPs
Nucleotide Protein
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