U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC106391616 probable WRKY transcription factor 54 [ Brassica napus (rape) ]

Gene ID: 106391616, updated on 30-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC106391616
Gene description
probable WRKY transcription factor 54
Locus tag
HID58_063303
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC106391616 in Genome Data Viewer
Location:
chromosome: C4
Exon count:
3
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) C4 NC_063447.1 (60326673..60328476, complement)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) C4 NC_027770.2 (68010565..68012429, complement)

Chromosome C4 - NC_063447.1Genomic Context describing neighboring genes Neighboring gene N-terminal kinase-like protein Neighboring gene WRKY transcription factor 55-like Neighboring gene rhodanese-like domain-containing protein 7 Neighboring gene E3 ubiquitin-protein ligase SHPRH

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
probable WRKY transcription factor 54
Names
BnaC04g47350D

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063447.1 Reference Da-Ae Primary Assembly

    Range
    60326673..60328476 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048755212.1 → XP_048611169.1  probable WRKY transcription factor 54

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases