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LOC106386850 zinc finger protein ZAT12 [ Brassica napus (rape) ]

Gene ID: 106386850, updated on 30-Nov-2023

Summary

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Gene symbol
LOC106386850
Gene description
zinc finger protein ZAT12
Locus tag
HID58_051132
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106386850 in Genome Data Viewer
Location:
chromosome: C3
Exon count:
1
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) C3 NC_063446.1 (6045506..6046327, complement)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) C3 NC_027769.2 (11125443..11126224, complement)

Chromosome C3 - NC_063446.1Genomic Context describing neighboring genes Neighboring gene gibberellin-regulated protein 10 Neighboring gene ras-related protein RABE1c Neighboring gene uncharacterized LOC125584171 Neighboring gene methyl-CpG-binding domain-containing protein 7 Neighboring gene transcription factor MYB59

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in response to chitin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein ZAT12
Names
BnaC03g11570D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063446.1 Reference Da-Ae Primary Assembly

    Range
    6045506..6046327 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013826666.3 → XP_013682120.1  zinc finger protein ZAT12

    UniProtKB/TrEMBL
    A0A816HZW6
    Conserved Domains (1) summary
    pfam13912
    Location:35 → 61
    zf-C2H2_6; C2H2-type zinc finger
Nucleotide Protein
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