U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC106384719 NAC domain-containing protein 89-like [ Brassica napus (rape) ]

Gene ID: 106384719, updated on 30-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC106384719
Gene description
NAC domain-containing protein 89-like
Locus tag
HID58_004723
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
Also known as
NAC89-1.1
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC106384719 in Genome Data Viewer
Location:
chromosome: A2
Exon count:
4
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) A2 NC_063435.1 (3259130..3260839, complement)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) A2 NC_027758.2 (6992134..6993782, complement)

Chromosome A2 - NC_063435.1Genomic Context describing neighboring genes Neighboring gene protein salt-induced and EIN3/EIL1-dependent 1-like Neighboring gene uncharacterized LOC106384732 Neighboring gene bifunctional nitrilase/nitrile hydratase NIT4 Neighboring gene ruvB-like protein 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
NAC domain-containing protein 89-like
Names
NAC transcription factor 89-1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001315862.1 → NP_001302791.1  NAC domain-containing protein 89-like

    Status: PROVISIONAL

    Source sequence(s)
    KF974764
    UniProtKB/TrEMBL
    A0A078FB97, A0A0C4MX44
    Conserved Domains (1) summary
    pfam02365
    Location:23 → 147
    NAM; No apical meristem (NAM) protein

RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063435.1 Reference Da-Ae Primary Assembly

    Range
    3259130..3260839 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases