U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC106372003 transcription repressor KAN1 [ Brassica napus (rape) ]

Gene ID: 106372003, updated on 30-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC106372003
Gene description
transcription repressor KAN1
Locus tag
HID58_039068
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC106372003 in Genome Data Viewer
Location:
chromosome: A10
Exon count:
6
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) A10 NC_063443.1 (15180008..15186938)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) A10 NC_027766.2 (15747813..15753571)

Chromosome A10 - NC_063443.1Genomic Context describing neighboring genes Neighboring gene probable inactive receptor kinase At5g16590 Neighboring gene glutamine synthetase cytosolic isozyme 1-4 Neighboring gene uncharacterized BNAA10G17930D Neighboring gene auxin efflux carrier component 5

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in abaxial cell fate specification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
transcription repressor KAN1
Names
BnaA10g17920D

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063443.1 Reference Da-Ae Primary Assembly

    Range
    15180008..15186938
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013812126.3 → XP_013667580.2  transcription repressor KAN1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases