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LOC106365342 mini zinc finger protein 3 [ Brassica napus (rape) ]

Gene ID: 106365342, updated on 30-Nov-2023

Summary

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Gene symbol
LOC106365342
Gene description
mini zinc finger protein 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106365342 in Genome Data Viewer
Location:
chromosome: A9
Exon count:
1
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) A9 NC_063442.1 (40541717..40543020)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) A9 NC_027765.2 (40541303..40541839)

Chromosome A9 - NC_063442.1Genomic Context describing neighboring genes Neighboring gene calcium-dependent protein kinase 10 Neighboring gene protein NRT1/ PTR FAMILY 2.9-like Neighboring gene probable WRKY transcription factor 61 Neighboring gene probable splicing factor 3A subunit 1 Neighboring gene agamous-like MADS-box protein AGL65

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of developmental process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mini zinc finger protein 3
Names
BnaA09g44460D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063442.1 Reference Da-Ae Primary Assembly

    Range
    40541717..40543020
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013804787.3 → XP_013660241.1  mini zinc finger protein 3

    UniProtKB/TrEMBL
    A0A078G5F0
    Conserved Domains (1) summary
    pfam04770
    Location:23 → 77
    ZF-HD_dimer; ZF-HD protein dimerization region
Nucleotide Protein
Heading Accession and Version

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