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LOC106361033 ethylene-responsive transcription factor ERF109 [ Brassica napus (rape) ]

Gene ID: 106361033, updated on 30-Nov-2023

Summary

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Gene symbol
LOC106361033
Gene description
ethylene-responsive transcription factor ERF109
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106361033 in Genome Data Viewer
Location:
chromosome: A8
Exon count:
1
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) A8 NC_063441.1 (13425148..13426362, complement)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) A8 NC_027764.2 (15908039..15909217, complement)

Chromosome A8 - NC_063441.1Genomic Context describing neighboring genes Neighboring gene SWI/SNF complex subunit SWI3D-like Neighboring gene uncharacterized BNAA08G11210D Neighboring gene extra-large guanine nucleotide-binding protein 2 Neighboring gene protein JINGUBANG-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ethylene-activated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ethylene-responsive transcription factor ERF109
Names
BnaA08g11220D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063441.1 Reference Da-Ae Primary Assembly

    Range
    13425148..13426362 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013800729.3 → XP_013656183.2  ethylene-responsive transcription factor ERF109

Nucleotide Protein
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