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LOC106360486 dof zinc finger protein DOF1.7 [ Brassica napus (rape) ]

Gene ID: 106360486, updated on 30-Nov-2023

Summary

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Gene symbol
LOC106360486
Gene description
dof zinc finger protein DOF1.7
Locus tag
HID58_028449
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106360486 in Genome Data Viewer
Location:
chromosome: A8
Exon count:
1
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) A8 NC_063441.1 (1789436..1790693, complement)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) A8 NC_027764.2 (1737049..1738108, complement)

Chromosome A8 - NC_063441.1Genomic Context describing neighboring genes Neighboring gene NADP-specific glutamate dehydrogenase Neighboring gene ubiquitin carboxyl-terminal hydrolase 6 Neighboring gene serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B Neighboring gene uncharacterized LOC106358698

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dof zinc finger protein DOF1.7
Names
BnaA08g01830D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063441.1 Reference Da-Ae Primary Assembly

    Range
    1789436..1790693 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013800091.3 → XP_013655545.1  dof zinc finger protein DOF1.7

    UniProtKB/TrEMBL
    A0A078IB66
    Conserved Domains (1) summary
    pfam02701
    Location:36 → 87
    zf-Dof; Dof domain, zinc finger
Nucleotide Protein
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