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LOC106348741 probable WRKY transcription factor 50 [ Brassica napus (rape) ]

Gene ID: 106348741, updated on 30-Nov-2023

Summary

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Gene symbol
LOC106348741
Gene description
probable WRKY transcription factor 50
Locus tag
HID58_077241
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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Location:
chromosome: C7
Exon count:
3
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) C7 NC_063450.1 (43083891..43085795)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) C7 NC_027773.2 (42452054..42453356)

Chromosome C7 - NC_063450.1Genomic Context describing neighboring genes Neighboring gene 5S ribosomal RNA Neighboring gene PHD finger protein ALFIN-LIKE 4-like Neighboring gene solute carrier family 25 member 44-like Neighboring gene protein PLASTID MOVEMENT IMPAIRED 1-RELATED 2 Neighboring gene uncharacterized protein At4g04775 Neighboring gene glutathione S-transferase T3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable WRKY transcription factor 50

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063450.1 Reference Da-Ae Primary Assembly

    Range
    43083891..43085795
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022706141.2 → XP_022561862.1  probable WRKY transcription factor 50

    UniProtKB/TrEMBL
    A0A078IRM8
    Conserved Domains (1) summary
    smart00774
    Location:115 → 172
    WRKY; DNA binding domain
Nucleotide Protein
Heading Accession and Version

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