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LOC106346178 NAC domain containing protein 52 [ Brassica napus (rape) ]

Gene ID: 106346178, updated on 30-Nov-2023

Summary

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Gene symbol
LOC106346178
Gene description
NAC domain containing protein 52
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC106346178 in Genome Data Viewer
Location:
chromosome: A1
Exon count:
4
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) A1 NC_063434.1 (28141727..28144047, complement)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) A1 NC_027757.2 (34283057..34285362, complement)

Chromosome A1 - NC_063434.1Genomic Context describing neighboring genes Neighboring gene NAC domain-containing protein 53 Neighboring gene NAC domain containing protein 52 Neighboring gene uncharacterized LOC106370479 Neighboring gene zinc finger protein ZAT5-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
NAC domain containing protein 52
Names
BnaA01g31670D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063434.1 Reference Da-Ae Primary Assembly

    Range
    28141727..28144047 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013785434.3 → XP_013640888.1  NAC domain containing protein 52

    UniProtKB/TrEMBL
    A0A078HU22, A0A816YEC2
    Conserved Domains (2) summary
    pfam02365
    Location:28 → 69
    NAM; No apical meristem (NAM) protein
    pfam16471
    Location:369 → 409
    JIP_LZII; JNK-interacting protein leucine zipper II
Nucleotide Protein
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