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LOC105977051 GATA transcription factor 9 [ Erythranthe guttata (spotted monkey flower) ]

Gene ID: 105977051, updated on 22-Oct-2023

Summary

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Gene symbol
LOC105977051
Gene description
GATA transcription factor 9
Locus tag
MIMGU_mgv1a008924mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Erythranthe guttata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Genomic context

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See LOC105977051 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Mimgu1_0 (GCF_000504015.1) Unplaced Scaffold NW_012194942.1 (950543..952432)

NW_012194942.1Genomic Context describing neighboring genes Neighboring gene homeobox-leucine zipper protein ATHB-8 Neighboring gene thioredoxin-related transmembrane protein 2 homolog Neighboring gene mitogen-activated protein kinase kinase kinase 1 Neighboring gene E3 ubiquitin-protein ligase HERC2 Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012194942.1 Unplaced Scaffold Reference Mimgu1_0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GATA transcription factor 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Erythranthe guttata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mimgu1_0 Primary Assembly

Genomic

  1. NW_012194942.1 Reference Mimgu1_0 Primary Assembly

    Range
    950543..952432
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013002313.1 → XP_012857767.1  GATA transcription factor 9

    See identical proteins and their annotated locations for XP_012857767.1

    UniProtKB/TrEMBL
    A0A022PVN4
    Conserved Domains (2) summary
    smart00401
    Location:247 → 296
    ZnF_GATA; zinc finger binding to DNA consensus sequence [AT]GATA[AG]
    pfam00320
    Location:249 → 284
    GATA; GATA zinc finger
Nucleotide Protein
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