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LOC105975210 floral homeotic protein GLOBOSA [ Erythranthe guttata (spotted monkey flower) ]

Gene ID: 105975210, updated on 22-Oct-2023

Summary

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Gene symbol
LOC105975210
Gene description
floral homeotic protein GLOBOSA
Locus tag
MIMGU_mgv1a013697mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Erythranthe guttata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Genomic context

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See LOC105975210 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Mimgu1_0 (GCF_000504015.1) Unplaced Scaffold NW_012194875.1 (481677..483929, complement)

NW_012194875.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105975153 Neighboring gene G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 Neighboring gene uncharacterized LOC105975205 Neighboring gene 3beta-hydroxysteroid-dehydrogenase/decarboxylase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012194875.1 Unplaced Scaffold Reference Mimgu1_0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
floral homeotic protein GLOBOSA

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Erythranthe guttata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mimgu1_0 Primary Assembly

Genomic

  1. NW_012194875.1 Reference Mimgu1_0 Primary Assembly

    Range
    481677..483929 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013000386.1 → XP_012855840.1  floral homeotic protein GLOBOSA isoform X2

    See identical proteins and their annotated locations for XP_012855840.1

    UniProtKB/TrEMBL
    A0A022Q213
    Conserved Domains (2) summary
    cd00265
    Location:2 → 80
    MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
    pfam01486
    Location:83 → 163
    K-box; K-box region

  2. XM_013000385.1 → XP_012855839.1  floral homeotic protein GLOBOSA isoform X1

    See identical proteins and their annotated locations for XP_012855839.1

    UniProtKB/TrEMBL
    A0A022Q636
    Conserved Domains (2) summary
    cd00265
    Location:2 → 80
    MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
    pfam01486
    Location:83 → 163
    K-box; K-box region
Nucleotide Protein
Heading Accession and Version

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