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LOC105963664 squamosa promoter-binding-like protein 8 [ Erythranthe guttata (spotted monkey flower) ]

Gene ID: 105963664, updated on 22-Oct-2023

Summary

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Gene symbol
LOC105963664
Gene description
squamosa promoter-binding-like protein 8
Locus tag
MIMGU_mgv1a009702mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Erythranthe guttata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Genomic context

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See LOC105963664 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Mimgu1_0 (GCF_000504015.1) Unplaced Scaffold NW_012193538.1 (219644..221661)

NW_012193538.1Genomic Context describing neighboring genes Neighboring gene 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial Neighboring gene uncharacterized LOC105963663 Neighboring gene squamosa promoter-binding-like protein 17 Neighboring gene metalloendoproteinase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012193538.1 Unplaced Scaffold Reference Mimgu1_0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
squamosa promoter-binding-like protein 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Erythranthe guttata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mimgu1_0 Primary Assembly

Genomic

  1. NW_012193538.1 Reference Mimgu1_0 Primary Assembly

    Range
    219644..221661
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012988094.1 → XP_012843548.1  squamosa promoter-binding-like protein 8

    See identical proteins and their annotated locations for XP_012843548.1

    UniProtKB/TrEMBL
    A0A022QTE2
    Conserved Domains (1) summary
    pfam03110
    Location:180 → 254
    SBP; SBP domain

  2. XM_012988095.1 → XP_012843549.1  squamosa promoter-binding-like protein 8

    See identical proteins and their annotated locations for XP_012843549.1

    UniProtKB/TrEMBL
    A0A022QTE2
    Conserved Domains (1) summary
    pfam03110
    Location:180 → 254
    SBP; SBP domain
Nucleotide Protein
Heading Accession and Version

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