U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC105963566 transcription factor HY5 [ Erythranthe guttata (spotted monkey flower) ]

Gene ID: 105963566, updated on 22-Oct-2023

Summary

Go to the top of the page Help
Gene symbol
LOC105963566
Gene description
transcription factor HY5
Locus tag
MIMGU_mgv1a015455mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Erythranthe guttata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC105963566 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Mimgu1_0 (GCF_000504015.1) Unplaced Scaffold NW_012193516.1 (62583..64996)

NW_012193516.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105963564 Neighboring gene protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3 Neighboring gene cellulose synthase A catalytic subunit 1 [UDP-forming] Neighboring gene adenine nucleotide transporter BT1, chloroplastic/mitochondrial-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_012193516.1 Unplaced Scaffold Reference Mimgu1_0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in red or far-red light signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of photomorphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to far red light IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to red light IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
transcription factor HY5

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Erythranthe guttata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mimgu1_0 Primary Assembly

Genomic

  1. NW_012193516.1 Reference Mimgu1_0 Primary Assembly

    Range
    62583..64996
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012987974.1 → XP_012843428.1  transcription factor HY5

    See identical proteins and their annotated locations for XP_012843428.1

    UniProtKB/TrEMBL
    A0A022QUH4
    Conserved Domains (1) summary
    cd14704
    Location:88 → 139
    bZIP_HY5-like; Basic leucine zipper (bZIP) domain of Plant Elongated/Long Hypocotyl5 (HY5)-like transcription factors and similar proteins: a DNA-binding and dimerization domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases