U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC105955006 ocs element-binding factor 1 [ Erythranthe guttata (spotted monkey flower) ]

Gene ID: 105955006, updated on 22-Oct-2023

Summary

Go to the top of the page Help
Gene symbol
LOC105955006
Gene description
ocs element-binding factor 1
Locus tag
MIMGU_mgv1a015990mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Erythranthe guttata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC105955006 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Mimgu1_0 (GCF_000504015.1) Unplaced Scaffold NW_012192829.1 (4545038..4546481)

NW_012192829.1Genomic Context describing neighboring genes Neighboring gene DNA mismatch repair protein MSH6 Neighboring gene PH-interacting protein Neighboring gene calvin cycle protein CP12-1, chloroplastic Neighboring gene probable glutamyl endopeptidase, chloroplastic

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_012192829.1 Unplaced Scaffold Reference Mimgu1_0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
ocs element-binding factor 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Erythranthe guttata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mimgu1_0 Primary Assembly

Genomic

  1. NW_012192829.1 Reference Mimgu1_0 Primary Assembly

    Range
    4545038..4546481
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012978710.1 → XP_012834164.1  ocs element-binding factor 1

    See identical proteins and their annotated locations for XP_012834164.1

    UniProtKB/TrEMBL
    A0A022S3G8
    Conserved Domains (1) summary
    cd14702
    Location:18 → 68
    bZIP_plant_GBF1; Basic leucine zipper (bZIP) domain of Plant G-box binding factor 1 (GBF1)-like transcription factors: a DNA-binding and dimerization domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases