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LOC105950766 transcription factor VIP1 [ Erythranthe guttata (spotted monkey flower) ]

Gene ID: 105950766, updated on 22-Oct-2023

Summary

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Gene symbol
LOC105950766
Gene description
transcription factor VIP1
Locus tag
MIMGU_mgv1a010892mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Erythranthe guttata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Genomic context

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See LOC105950766 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Mimgu1_0 (GCF_000504015.1) Unplaced Scaffold NW_012195031.1 (305117..308048, complement)

NW_012195031.1Genomic Context describing neighboring genes Neighboring gene serine decarboxylase Neighboring gene abscisic acid 8'-hydroxylase 3-like Neighboring gene F-box/kelch-repeat protein At1g57790-like Neighboring gene uncharacterized LOC105950791

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012195031.1 Unplaced Scaffold Reference Mimgu1_0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor VIP1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Erythranthe guttata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mimgu1_0 Primary Assembly

Genomic

  1. NW_012195031.1 Reference Mimgu1_0 Primary Assembly

    Range
    305117..308048 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012974130.1 → XP_012829584.1  transcription factor VIP1

    See identical proteins and their annotated locations for XP_012829584.1

    UniProtKB/TrEMBL
    A0A022PPX0
    Conserved Domains (2) summary
    cd14703
    Location:158 → 207
    bZIP_plant_RF2; Basic leucine zipper (bZIP) domain of Plant RF2-like transcription factors: a DNA-binding and dimerization domain
    pfam14735
    Location:132 → 242
    HAUS4; HAUS augmin-like complex subunit 4
Nucleotide Protein
Heading Accession and Version

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