U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC105804829 transcription factor bHLH94 [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105804829, updated on 23-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC105804829
Gene description
transcription factor bHLH94
Locus tag
B456_007G294800
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC105804829 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
3
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 11 NC_068575.1 (8623285..8624974)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 7 NC_026935.1 (50490805..50492424, complement)

Chromosome 11 - NC_068575.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase ATL6 Neighboring gene E3 ubiquitin-protein ligase ATL6 Neighboring gene uncharacterized LOC105801259 Neighboring gene kinesin-like protein KIN-1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
transcription factor bHLH94

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068575.1 Reference ASM2569854v1 Primary Assembly

    Range
    8623285..8624974
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012637610.2 → XP_012493064.1  transcription factor bHLH94

    See identical proteins and their annotated locations for XP_012493064.1

    UniProtKB/TrEMBL
    A0A0D2R1H3, A0A7J8PPN5
    Conserved Domains (1) summary
    cd11448
    Location:115 → 185
    bHLH_AtFAMA_like; basic helix-loop-helix (bHLH) domain found in Arabidopsis thaliana protein FAMA and similar proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases