U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC105802132 auxin response factor 2B [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105802132, updated on 23-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC105802132
Gene description
auxin response factor 2B
Locus tag
B456_007G044900
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC105802132 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
15
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 11 NC_068575.1 (60074570..60079766)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 7 NC_026935.1 (3124096..3129387, complement)

Chromosome 11 - NC_068575.1Genomic Context describing neighboring genes Neighboring gene ethylene-responsive transcription factor ERF114 Neighboring gene protein BONZAI 2 Neighboring gene transcription factor ICE1 Neighboring gene serine carboxypeptidase-like 45

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to hormone IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
auxin response factor 2B

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068575.1 Reference ASM2569854v1 Primary Assembly

    Range
    60074570..60079766
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012633596.2 → XP_012489050.1  auxin response factor 2B

    See identical proteins and their annotated locations for XP_012489050.1

    UniProtKB/TrEMBL
    A0A0D2S6W7, A0A0D2SE23
    Conserved Domains (3) summary
    pfam02309
    Location:741 → 816
    AUX_IAA; AUX/IAA family
    pfam02362
    Location:163 → 264
    B3; B3 DNA binding domain
    pfam06507
    Location:289 → 371
    Auxin_resp; Auxin response factor
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases