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LOC105802121 NAC domain-containing protein 83 [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105802121, updated on 23-Nov-2023

Summary

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Gene symbol
LOC105802121
Gene description
NAC domain-containing protein 83
Locus tag
B456_007G043900
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC105802121 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
3
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 11 NC_068575.1 (60170134..60171324, complement)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 7 NC_026935.1 (3033287..3034430)

Chromosome 11 - NC_068575.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105802123 Neighboring gene uncharacterized LOC105802122 Neighboring gene transfer RNA glutamine (anticodon UUG) Neighboring gene bidirectional sugar transporter SWEET12

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
NAC domain-containing protein 83

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068575.1 Reference ASM2569854v1 Primary Assembly

    Range
    60170134..60171324 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012633583.2 → XP_012489037.1  NAC domain-containing protein 83

    See identical proteins and their annotated locations for XP_012489037.1

    UniProtKB/TrEMBL
    A0A0D2QLE9, A0A7J8PIQ9
    Conserved Domains (1) summary
    pfam02365
    Location:15 → 56
    NAM; No apical meristem (NAM) protein
Nucleotide Protein
Heading Accession and Version

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