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LOC105801992 NAC domain-containing protein 71 [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105801992, updated on 23-Nov-2023

Summary

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Gene symbol
LOC105801992
Gene description
NAC domain-containing protein 71
Locus tag
B456_007G031300
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC105801992 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
3
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 11 NC_068575.1 (61034598..61036637, complement)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 7 NC_026935.1 (2162168..2167694)

Chromosome 11 - NC_068575.1Genomic Context describing neighboring genes Neighboring gene mitochondrial carnitine/acylcarnitine carrier-like protein Neighboring gene AP-2 complex subunit mu Neighboring gene transfer RNA cysteine (anticodon GCA) Neighboring gene pentatricopeptide repeat-containing protein At5g46580, chloroplastic Neighboring gene glycine cleavage system H protein, mitochondrial

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres. Paterson AH, et al. Nature, 2012 Dec 20. PMID 23257886
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
NAC domain-containing protein 71
Names
NAC domain-containing protein 45

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068575.1 Reference ASM2569854v1 Primary Assembly

    Range
    61034598..61036637 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012633385.2 → XP_012488839.1  NAC domain-containing protein 71

    See identical proteins and their annotated locations for XP_012488839.1

    UniProtKB/TrEMBL
    A0A0D2T842
    Conserved Domains (1) summary
    pfam02365
    Location:8 → 133
    NAM; No apical meristem (NAM) protein
Nucleotide Protein
Heading Accession and Version

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