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LOC105801413 transcription factor LAF1 [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105801413, updated on 11-Feb-2023

Summary

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Gene symbol
LOC105801413
Gene description
transcription factor LAF1
Locus tag
B456_007G011100
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC105801413 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
3
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 11 NC_068575.1 (62337206..62338829, complement)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 7 NC_026935.1 (876652..878203)

Chromosome 11 - NC_068575.1Genomic Context describing neighboring genes Neighboring gene signal peptide peptidase-like 1 Neighboring gene tripeptidyl-peptidase 2 Neighboring gene tetrahydroberberine oxidase Neighboring gene heat stress transcription factor B-2a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
transcription factor LAF1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068575.1 Reference ASM2569854v1 Primary Assembly

    Range
    62337206..62338829 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012632715.2 → XP_012488169.1  transcription factor LAF1

    See identical proteins and their annotated locations for XP_012488169.1

    UniProtKB/TrEMBL
    A0A0D2S4Y6
    Conserved Domains (2) summary
    smart00717
    Location:72 → 116
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
    pfam00249
    Location:16 → 63
    Myb_DNA-binding; Myb-like DNA-binding domain
Nucleotide Protein
Heading Accession and Version

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