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LOC105800307 zinc finger protein 4 [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105800307, updated on 23-Nov-2023

Summary

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Gene symbol
LOC105800307
Gene description
zinc finger protein 4
Locus tag
B456_001G196800
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC105800307 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
2
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 7 NC_068571.1 (17377742..17381831)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 1 NC_026929.1 (34552083..34556203, complement)

Chromosome 7 - NC_068571.1Genomic Context describing neighboring genes Neighboring gene aspartic proteinase NANA, chloroplast Neighboring gene uncharacterized LOC105800318 Neighboring gene uncharacterized LOC105763506 Neighboring gene small nucleolar RNA R71

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in negative regulation of abscisic acid-activated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068571.1 Reference ASM2569854v1 Primary Assembly

    Range
    17377742..17381831
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052633261.1 → XP_052489221.1  zinc finger protein 4

    UniProtKB/TrEMBL
    A0A0D2QSY4

  2. XM_012631348.2 → XP_012486802.1  zinc finger protein 4

    See identical proteins and their annotated locations for XP_012486802.1

    UniProtKB/TrEMBL
    A0A0D2QSY4
    Conserved Domains (1) summary
    pfam13912
    Location:87 → 113
    zf-C2H2_6; C2H2-type zinc finger
Nucleotide Protein
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