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LOC105800108 transcription factor TCP19 [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105800108, updated on 23-Nov-2023

Summary

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Gene symbol
LOC105800108
Gene description
transcription factor TCP19
Locus tag
B456_006G197000
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC105800108 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
1
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 9 NC_068573.1 (44315394..44317184, complement)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 6 NC_026934.1 (45427048..45429125, complement)

Chromosome 9 - NC_068573.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105800107 Neighboring gene uncharacterized LOC105800109 Neighboring gene uncharacterized LOC105800110 Neighboring gene ethylene-responsive transcription factor ERF027

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor TCP19

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068573.1 Reference ASM2569854v1 Primary Assembly

    Range
    44315394..44317184 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052620896.1 → XP_052476856.1  transcription factor TCP19

    UniProtKB/TrEMBL
    A0A0D2T135
Nucleotide Protein
Heading Accession and Version

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