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LOC105799410 transcription factor MYB46 [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105799410, updated on 11-Feb-2023

Summary

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Gene symbol
LOC105799410
Gene description
transcription factor MYB46
Locus tag
B456_006G129100
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC105799410 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
2
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 9 NC_068573.1 (37073066..37077056, complement)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 6 NC_026934.1 (38252565..38256637, complement)

Chromosome 9 - NC_068573.1Genomic Context describing neighboring genes Neighboring gene protein DETOXIFICATION 42 Neighboring gene dicarboxylate transporter 1, chloroplastic Neighboring gene xanthine dehydrogenase 1 Neighboring gene arogenate dehydrogenase 1, chloroplastic

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
transcription factor MYB46

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068573.1 Reference ASM2569854v1 Primary Assembly

    Range
    37073066..37077056 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012629953.2 → XP_012485407.1  transcription factor MYB46

    See identical proteins and their annotated locations for XP_012485407.1

    UniProtKB/TrEMBL
    A0A0D2RVA4
    Conserved Domains (2) summary
    smart00717
    Location:74 → 121
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
    pfam00249
    Location:74 → 117
    Myb_DNA-binding; Myb-like DNA-binding domain
Nucleotide Protein
Heading Accession and Version

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