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LOC105797821 transcription factor PRE3 [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105797821, updated on 23-Nov-2023

Summary

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Gene symbol
LOC105797821
Gene description
transcription factor PRE3
Locus tag
B456_006G021500
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC105797821 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
2
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 9 NC_068573.1 (5551601..5552392, complement)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 6 NC_026934.1 (5480620..5481348, complement)

Chromosome 9 - NC_068573.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105797410 Neighboring gene uncharacterized LOC105797411 Neighboring gene ABC transporter B family member 19 Neighboring gene uncharacterized LOC105797412 Neighboring gene small nucleolar RNA R71

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor PRE3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068573.1 Reference ASM2569854v1 Primary Assembly

    Range
    5551601..5552392 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012627729.2 → XP_012483183.1  transcription factor PRE3

    See identical proteins and their annotated locations for XP_012483183.1

    UniProtKB/TrEMBL
    A0A0D2RP29
    Conserved Domains (1) summary
    PLN03217
    Location:10 → 97
    PLN03217; transcription factor ATBS1; Provisional
Nucleotide Protein
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