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LOC105794180 transcription factor PRE6 [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105794180, updated on 23-Nov-2023

Summary

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Gene symbol
LOC105794180
Gene description
transcription factor PRE6
Locus tag
B456_005G139900
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC105794180 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
2
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 3 NC_068567.1 (36386566..36387715, complement)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 5 NC_026933.1 (36827452..36828569, complement)

Chromosome 3 - NC_068567.1Genomic Context describing neighboring genes Neighboring gene binding partner of ACD11 1 Neighboring gene uncharacterized LOC105795848 Neighboring gene small nucleolar RNA R71 Neighboring gene peptidyl-prolyl cis-trans isomerase CYP23

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of growth IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor PRE6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068567.1 Reference ASM2569854v1 Primary Assembly

    Range
    36386566..36387715 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012623221.2 → XP_012478675.1  transcription factor PRE6

    See identical proteins and their annotated locations for XP_012478675.1

    UniProtKB/TrEMBL
    A0A0D2SGN6
    Conserved Domains (1) summary
    PLN03217
    Location:16 → 93
    PLN03217; transcription factor ATBS1; Provisional
Nucleotide Protein
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