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LOC105792366 NAC domain-containing protein 1 [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105792366, updated on 23-Nov-2023

Summary

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Gene symbol
LOC105792366
Gene description
NAC domain-containing protein 1
Locus tag
B456_004G227000
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC105792366 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
6
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 8 NC_068572.1 (56476492..56479462)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 4 NC_026932.1 (56133399..56137475)

Chromosome 8 - NC_068572.1Genomic Context describing neighboring genes Neighboring gene oleoyl-acyl carrier protein thioesterase 1, chloroplastic Neighboring gene FHA domain-containing protein FHA2-like Neighboring gene L-ascorbate peroxidase, cytosolic Neighboring gene uncharacterized LOC128043074

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
NAC domain-containing protein 1; NAC domain-containing protein JA2L

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068572.1 Reference ASM2569854v1 Primary Assembly

    Range
    56476492..56479462
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012620910.2 → XP_012476364.1  NAC domain-containing protein JA2L isoform X2

    Conserved Domains (1) summary
    pfam02365
    Location:6 → 47
    NAM; No apical meristem (NAM) protein

  2. XM_012620909.2 → XP_012476363.1  NAC domain-containing protein JA2L isoform X1

    See identical proteins and their annotated locations for XP_012476363.1

    UniProtKB/TrEMBL
    A0A0D2PGQ7
    Conserved Domains (1) summary
    pfam02365
    Location:6 → 47
    NAM; No apical meristem (NAM) protein

  3. XM_012620911.2 → XP_012476365.1  NAC domain-containing protein 1 isoform X3

    See identical proteins and their annotated locations for XP_012476365.1

    UniProtKB/TrEMBL
    A0A0D2N2D9
    Conserved Domains (1) summary
    pfam02365
    Location:6 → 47
    NAM; No apical meristem (NAM) protein
Nucleotide Protein
Heading Accession and Version

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